Store Microarray Estimates from Log-ratios
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This dialog allows you to save results when estimating log-ratios for microarray data. These results are saved when an analysis is run and should be specified before running an analysis.

Save

After checking the appropriate boxes, you need to type names for the data structures into the corresponding fields. The table below indicates the type of structures formed for each item.
Probe/Gene IDsfactor The list of probes/gene identifiers to index the results.
Estimatespointer The estimates will be saved in unnamed variates pointed to by this pointer. There will be one variate for each treatment/target.
Standard Errors of Estimatespointer The standard errors of the estimates will be saved in unnamed variates pointed to by this pointer. There will be one variate for each treatment/target.
Residual Degrees of Freedomvariate The residual degrees of freedom from the ANOVA for each probe/gene.
Residual Standard Deviationvariate The square root of the residual mean square from the ANOVA for each probe/gene.
Dye Bias Effectsvariate The estimated dye bias effects for each probe/gene.
t-valuespointer The t-values (the estimates divided by their standard errors) will be saved in unnamed variates pointed to by this pointer. There will be one variate for each treatment/target.
Probabilities of Estimatespointer The two sided probabilities of a t-value of the estimates being more extreme than the observed t-values will be saved in unnamed variates pointed to by this pointer. There will be one variate for each treatment/target.
Contrast Estimatespointer The contrast estimates will be saved in unnamed variates pointed to by this pointer. There will be one variate for each contrast.
Contrast t-valuespointer The contrast t-values (the contrasts divided by their standard errors) will be saved in unnamed variates pointed to by this pointer. There will be one variate for each contrast.
Probabilities of Contrast Estimatespointer The two sided probabilities of contrast t-values being more extreme than the observed t-values will be saved in unnamed variates pointed to by this pointer. There will be one variate for each contrast.

Display in Spreadsheet

The saved results will also be displayed within a new spreadsheet window.

Action Buttons

OKSave the store settings and close the dialog.
CancelClose the dialog without making any changes.

See Also